diff --git a/Makefile.in b/Makefile.in
--- a/Makefile.in
+++ b/Makefile.in
@@ -37,19 +37,19 @@ EXE := @exe@
 LIBPREFIX := @libprefix@
 REV := @rev@
 install_suffix := @install_suffix@
 ABI := @abi@
 XSLTPROC := @XSLTPROC@
 AUTOCONF := @AUTOCONF@
 _RPATH = @RPATH@
 RPATH = $(if $(1),$(call _RPATH,$(1)))
-cfghdrs_in := @cfghdrs_in@
+cfghdrs_in := $(addprefix $(srcroot),@cfghdrs_in@)
 cfghdrs_out := @cfghdrs_out@
-cfgoutputs_in := @cfgoutputs_in@
+cfgoutputs_in := $(addprefix $(srcroot),@cfgoutputs_in@)
 cfgoutputs_out := @cfgoutputs_out@
 enable_autogen := @enable_autogen@
 enable_code_coverage := @enable_code_coverage@
 enable_experimental := @enable_experimental@
 enable_zone_allocator := @enable_zone_allocator@
 DSO_LDFLAGS = @DSO_LDFLAGS@
 SOREV = @SOREV@
 PIC_CFLAGS = @PIC_CFLAGS@
diff --git a/configure b/configure
--- a/configure
+++ b/configure
@@ -5654,25 +5654,25 @@ else
 fi
 
 install_suffix="$INSTALL_SUFFIX"
 
 
 je_="je_"
 
 
-cfgoutputs_in="${srcroot}Makefile.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/html.xsl.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/manpages.xsl.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/jemalloc.xml.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/jemalloc_macros.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/jemalloc_protos.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/internal/jemalloc_internal.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}test/test.sh.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}test/include/test/jemalloc_test.h.in"
+cfgoutputs_in="Makefile.in"
+cfgoutputs_in="${cfgoutputs_in} doc/html.xsl.in"
+cfgoutputs_in="${cfgoutputs_in} doc/manpages.xsl.in"
+cfgoutputs_in="${cfgoutputs_in} doc/jemalloc.xml.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/jemalloc_macros.h.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/jemalloc_protos.h.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/internal/jemalloc_internal.h.in"
+cfgoutputs_in="${cfgoutputs_in} test/test.sh.in"
+cfgoutputs_in="${cfgoutputs_in} test/include/test/jemalloc_test.h.in"
 
 cfgoutputs_out="Makefile"
 cfgoutputs_out="${cfgoutputs_out} doc/html.xsl"
 cfgoutputs_out="${cfgoutputs_out} doc/manpages.xsl"
 cfgoutputs_out="${cfgoutputs_out} doc/jemalloc.xml"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/jemalloc_macros.h"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/jemalloc_protos.h"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/internal/jemalloc_internal.h"
@@ -5684,28 +5684,28 @@ cfgoutputs_tup="${cfgoutputs_tup} doc/ht
 cfgoutputs_tup="${cfgoutputs_tup} doc/manpages.xsl:doc/manpages.xsl.in"
 cfgoutputs_tup="${cfgoutputs_tup} doc/jemalloc.xml:doc/jemalloc.xml.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/jemalloc_macros.h:include/jemalloc/jemalloc_macros.h.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/jemalloc_protos.h:include/jemalloc/jemalloc_protos.h.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/internal/jemalloc_internal.h"
 cfgoutputs_tup="${cfgoutputs_tup} test/test.sh:test/test.sh.in"
 cfgoutputs_tup="${cfgoutputs_tup} test/include/test/jemalloc_test.h:test/include/test/jemalloc_test.h.in"
 
-cfghdrs_in="${srcroot}include/jemalloc/jemalloc_defs.h.in"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/jemalloc_internal_defs.h.in"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_namespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_unnamespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_symbols.txt"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/public_namespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/public_unnamespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/size_classes.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc_rename.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc_mangle.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}test/include/test/jemalloc_test_defs.h.in"
+cfghdrs_in="include/jemalloc/jemalloc_defs.h.in"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/jemalloc_internal_defs.h.in"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_namespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_unnamespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_symbols.txt"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/public_namespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/public_unnamespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/size_classes.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc_rename.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc_mangle.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc.sh"
+cfghdrs_in="${cfghdrs_in} test/include/test/jemalloc_test_defs.h.in"
 
 cfghdrs_out="include/jemalloc/jemalloc_defs.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc${install_suffix}.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/private_namespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/private_unnamespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_symbols.txt"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_namespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_unnamespace.h"
@@ -5713,18 +5713,18 @@ cfghdrs_out="${cfghdrs_out} include/jema
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_protos_jet.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_rename.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_mangle.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_mangle_jet.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/jemalloc_internal_defs.h"
 cfghdrs_out="${cfghdrs_out} test/include/test/jemalloc_test_defs.h"
 
 cfghdrs_tup="include/jemalloc/jemalloc_defs.h:include/jemalloc/jemalloc_defs.h.in"
-cfghdrs_tup="${cfghdrs_tup} include/jemalloc/internal/jemalloc_internal_defs.h:${srcroot}include/jemalloc/internal/jemalloc_internal_defs.h.in"
-cfghdrs_tup="${cfghdrs_tup} test/include/test/jemalloc_test_defs.h:${srcroot}test/include/test/jemalloc_test_defs.h.in"
+cfghdrs_tup="${cfghdrs_tup} include/jemalloc/internal/jemalloc_internal_defs.h:include/jemalloc/internal/jemalloc_internal_defs.h.in"
+cfghdrs_tup="${cfghdrs_tup} test/include/test/jemalloc_test_defs.h:test/include/test/jemalloc_test_defs.h.in"
 
 # Check whether --enable-cc-silence was given.
 if test "${enable_cc_silence+set}" = set; then :
   enableval=$enable_cc_silence; if test "x$enable_cc_silence" = "xno" ; then
   enable_cc_silence="0"
 else
   enable_cc_silence="1"
 fi
diff --git a/configure.ac b/configure.ac
--- a/configure.ac
+++ b/configure.ac
@@ -546,25 +546,25 @@ AC_ARG_WITH([install_suffix],
 install_suffix="$INSTALL_SUFFIX"
 AC_SUBST([install_suffix])
 
 dnl Substitute @je_@ in jemalloc_protos.h.in, primarily to make generation of
 dnl jemalloc_protos_jet.h easy.
 je_="je_"
 AC_SUBST([je_])
 
-cfgoutputs_in="${srcroot}Makefile.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/html.xsl.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/manpages.xsl.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}doc/jemalloc.xml.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/jemalloc_macros.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/jemalloc_protos.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}include/jemalloc/internal/jemalloc_internal.h.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}test/test.sh.in"
-cfgoutputs_in="${cfgoutputs_in} ${srcroot}test/include/test/jemalloc_test.h.in"
+cfgoutputs_in="Makefile.in"
+cfgoutputs_in="${cfgoutputs_in} doc/html.xsl.in"
+cfgoutputs_in="${cfgoutputs_in} doc/manpages.xsl.in"
+cfgoutputs_in="${cfgoutputs_in} doc/jemalloc.xml.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/jemalloc_macros.h.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/jemalloc_protos.h.in"
+cfgoutputs_in="${cfgoutputs_in} include/jemalloc/internal/jemalloc_internal.h.in"
+cfgoutputs_in="${cfgoutputs_in} test/test.sh.in"
+cfgoutputs_in="${cfgoutputs_in} test/include/test/jemalloc_test.h.in"
 
 cfgoutputs_out="Makefile"
 cfgoutputs_out="${cfgoutputs_out} doc/html.xsl"
 cfgoutputs_out="${cfgoutputs_out} doc/manpages.xsl"
 cfgoutputs_out="${cfgoutputs_out} doc/jemalloc.xml"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/jemalloc_macros.h"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/jemalloc_protos.h"
 cfgoutputs_out="${cfgoutputs_out} include/jemalloc/internal/jemalloc_internal.h"
@@ -576,28 +576,28 @@ cfgoutputs_tup="${cfgoutputs_tup} doc/ht
 cfgoutputs_tup="${cfgoutputs_tup} doc/manpages.xsl:doc/manpages.xsl.in"
 cfgoutputs_tup="${cfgoutputs_tup} doc/jemalloc.xml:doc/jemalloc.xml.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/jemalloc_macros.h:include/jemalloc/jemalloc_macros.h.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/jemalloc_protos.h:include/jemalloc/jemalloc_protos.h.in"
 cfgoutputs_tup="${cfgoutputs_tup} include/jemalloc/internal/jemalloc_internal.h"
 cfgoutputs_tup="${cfgoutputs_tup} test/test.sh:test/test.sh.in"
 cfgoutputs_tup="${cfgoutputs_tup} test/include/test/jemalloc_test.h:test/include/test/jemalloc_test.h.in"
 
-cfghdrs_in="${srcroot}include/jemalloc/jemalloc_defs.h.in"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/jemalloc_internal_defs.h.in"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_namespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_unnamespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/private_symbols.txt"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/public_namespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/public_unnamespace.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/internal/size_classes.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc_rename.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc_mangle.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}include/jemalloc/jemalloc.sh"
-cfghdrs_in="${cfghdrs_in} ${srcroot}test/include/test/jemalloc_test_defs.h.in"
+cfghdrs_in="include/jemalloc/jemalloc_defs.h.in"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/jemalloc_internal_defs.h.in"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_namespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_unnamespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/private_symbols.txt"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/public_namespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/public_unnamespace.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/internal/size_classes.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc_rename.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc_mangle.sh"
+cfghdrs_in="${cfghdrs_in} include/jemalloc/jemalloc.sh"
+cfghdrs_in="${cfghdrs_in} test/include/test/jemalloc_test_defs.h.in"
 
 cfghdrs_out="include/jemalloc/jemalloc_defs.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc${install_suffix}.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/private_namespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/private_unnamespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_symbols.txt"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_namespace.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/public_unnamespace.h"
@@ -605,18 +605,18 @@ cfghdrs_out="${cfghdrs_out} include/jema
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_protos_jet.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_rename.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_mangle.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/jemalloc_mangle_jet.h"
 cfghdrs_out="${cfghdrs_out} include/jemalloc/internal/jemalloc_internal_defs.h"
 cfghdrs_out="${cfghdrs_out} test/include/test/jemalloc_test_defs.h"
 
 cfghdrs_tup="include/jemalloc/jemalloc_defs.h:include/jemalloc/jemalloc_defs.h.in"
-cfghdrs_tup="${cfghdrs_tup} include/jemalloc/internal/jemalloc_internal_defs.h:${srcroot}include/jemalloc/internal/jemalloc_internal_defs.h.in"
-cfghdrs_tup="${cfghdrs_tup} test/include/test/jemalloc_test_defs.h:${srcroot}test/include/test/jemalloc_test_defs.h.in"
+cfghdrs_tup="${cfghdrs_tup} include/jemalloc/internal/jemalloc_internal_defs.h:include/jemalloc/internal/jemalloc_internal_defs.h.in"
+cfghdrs_tup="${cfghdrs_tup} test/include/test/jemalloc_test_defs.h:test/include/test/jemalloc_test_defs.h.in"
 
 dnl Do not silence irrelevant compiler warnings by default, since enabling this
 dnl option incurs a performance penalty.
 AC_ARG_ENABLE([cc-silence],
   [AS_HELP_STRING([--enable-cc-silence],
                   [Silence irrelevant compiler warnings])],
 [if test "x$enable_cc_silence" = "xno" ; then
   enable_cc_silence="0"
